Learn from Doxygen source code how to optimize the memory usage.

When the processes running on your machine attempt to allocate more memory than your system has available, the kernel begins to swap memory pages to and from the disk. This is done in order to free up sufficient physical memory to meet the RAM allocation requirements of the requestor.

Excessive use of swapping is called thrashing and is undesirable because it lowers overall system performance, mainly because hard drives are far slower than RAM.

If your application needs to use a large amount of data, you will be exposed to thrashing and your application could slow dramatically. Two solutions exist: either optimize your applications to use memory more efficiently, or add more physical RAM to the system.

Let’s discover which solution Doxygen  uses, to optimize its memory usage and avoid the thrashing problem.

Doxygen is the de facto standard tool for generating documentation from annotated C++ sources, but it also supports other popular programming languages such as C, Objective-C, C#, PHP, Java, Python, and many others. Thanks to Dimitri van Heesch for his great effort  to develop and maintain the project.

Doxygen take as entry the source files, parse them to extract the needed data  and store the result in  class instances of kind DirDef, FileDef, NamespaceDef, ClassDef and MemberDef. All inherits from the Definition class .

 

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The instances of these classes will be used after to generate the documentation. The data consuming more memory are these concerning the information about methods and variables which are represented by the MemberDef class, the size of these instances could growth to exceeds more than 1 Go, it depends on the number of methods and variables of the projects treated.

For some projects store all these instances in memory will impact the system performance, and the generation of the documentation could take many hours.

How Doxygen optimize the memory?

Doxygen uses a solution based on cache, using a cache is a popular way to optimize your memory usage. The idea is to store in a cache the data needed to be in memory; this cache will contains many slots, each one containing a specific piece of data, and some slots will be released if the cache size exceeds a certain value. The data released will be present on disk, and if we need them again they will be moved to memory. 

In case of Doxygen the algorithm is very simple:

  • Defines a cache with 65535 slots.
  • When a MemberDef instance needs to be created, Doxygen checks if a cache slot is available, if it’s the case the instance will be created in memory, else it’s stored in a data file in the disk, and an index file is updated to store where in the data file this data are stored.
  • If Doxygen needs to access a MemberDef instance, it checks its presence in cache. If it’s not present, Doxygen gets from the index file where its data are stored, seek to this position in the data file and loads it from the Disk.

The performance of the cache depends on:

  • The container: It could be a queue, an array, a list or maybe a custom container. The choice of one of these containers could impact your cache performance.
  • The max size of the cache.
  • The algorithm used to free entries from the cache. When the cache reaches its maximum, you have to decide which entries to release, for example you could:
    • Release the first slots loaded.
    • Release the last slots loaded.
    • Release the less-used slots.

1- The Container

Doxygen defines the ObjCache class which is a linked list of CacheNode class, this class is responsible to add and remove  instances from the cache.

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Here’s how Doxygen declare its cache:

Doxygen::symbolCache   =new ObjCache(16+cacheSize);// 16 -> room for 65536 elements, 

2 – Cache size

Doxygen gets the cache max size from the configuration file:

int cacheSize =Config_getInt("SYMBOL_CACHE_SIZE");


It’s a good idea to let this parameter be configurable, so you can increase the cache if you have a machine with a big physical memory size to increase the cache performance. However, for the newer Doxygen releases this parameter is removed from the configuration file, and a default value is used.

3-The algorithm to release entries from cache

Here’s the code snippet from Doxygen code source responsible for releasing the cache when it reaches its maximum:

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As specified in the makeResident method code, which is very well commented, the least recently used item is removed if the cache is full.

This method is invoked for almost all MemberDef methods, it’s called each time you have to access the MemberDef state to check if this member is loaded or not. Load it if it’s not the case and remove the least recently used member from the cache. 

The impact of using the cache

Using the cache could increase the performance of your application, but did the cache bring a big optimisation or just a micro optimisation and it’s not worth to add it in your application?

Before using Clang as C/C++ parser for our product, we used Doxygen as parser for our first version, we did many test on cache size, when we disabled  the cache and  parse some C++ projects with this modified version, the parsing time has much increased, sometimes from 5 min to 25 min. For big projects it takes hours and it impact a lot the system performance.

Conclusion

Using the cache is a powerful solution to increase the performance of your application if you use a large amount of data. Discovering how the open-source projects implements the cache could be very useful to understand how to implements it in your applications.

 

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